Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443550_102268 | Not Available | Negative | 1056327 - 1056881 | 20338.9 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05443550_102269 | Not Available | Positive | 1056968 - 1058110 | 43177.0 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN05443550_102270 | Not Available | Positive | 1058177 - 1058728 | 19346.0 |
| cupin-like domain-containing protein | SAMN05443550_102271 | Not Available | Positive | 1058872 - 1059753 | 34318.4 |
| cupin-like domain-containing protein | SAMN05443550_102272 | Not Available | Positive | 1059833 - 1060717 | 33557.8 |
| von willebrand factor type a domain-containing protein | SAMN05443550_102273 | Not Available | Positive | 1060896 - 1061993 | 41626.8 |
| magnesium chelatase subunit i | SAMN05443550_102274 | Not Available | Positive | 1062011 - 1063507 | 56471.7 |
| hypothetical protein | SAMN05443550_102275 | Not Available | Positive | 1063535 - 1064788 | 47215.9 |
| two-component system, ompr family, response regulator mtra | SAMN05443550_102276 | Not Available | Negative | 1064829 - 1065518 | 26511.3 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05443550_102277 | Not Available | Negative | 1065523 - 1067193 | 64413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
