Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05443550_102218 | Not Available | Positive | 997809 - 1001009 | 114662.0 |
| starch-binding associating with outer membrane | SAMN05443550_102219 | Not Available | Positive | 1001015 - 1002442 | 52074.5 |
| transketolase | SAMN05443550_102220 | Not Available | Negative | 1002553 - 1004562 | 73138.9 |
| aldose 1-epimerase | SAMN05443550_102221 | Not Available | Negative | 1004620 - 1005801 | 42556.9 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05443550_102222 | Not Available | Positive | 1005949 - 1006656 | 27155.0 |
| l-ribulokinase | SAMN05443550_102223 | Not Available | Positive | 1007250 - 1008932 | 61693.4 |
| l-ribulose 5-phosphate 4-epimerase | SAMN05443550_102224 | Not Available | Positive | 1008945 - 1009643 | 25871.6 |
| l-arabinose isomerase | SAMN05443550_102225 | Not Available | Positive | 1009653 - 1011158 | 56132.1 |
| solute:na+ symporter, sss family | SAMN05443550_102226 | Not Available | Positive | 1011189 - 1012874 | 61000.9 |
| transcriptional regulator, arac family | SAMN05443550_102227 | Not Available | Negative | 1013108 - 1013971 | 33107.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
