Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN05443550_102177 | Not Available | Negative | 952604 - 953497 | 33730.4 |
| hypothetical protein | SAMN05443550_102178 | Not Available | Negative | 953678 - 954535 | 31852.6 |
| cysteinyl-trna synthetase | SAMN05443550_102179 | Not Available | Negative | 954566 - 956050 | 56582.4 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05443550_102180 | Not Available | Negative | 956108 - 957217 | 41914.4 |
| membrane associated serine protease, rhomboid family | SAMN05443550_102181 | Not Available | Negative | 957217 - 958086 | 32580.3 |
| rhomboid-like protein | SAMN05443550_102182 | Not Available | Negative | 958079 - 958813 | 27198.5 |
| dna mismatch repair protein mutl | SAMN05443550_102183 | Not Available | Negative | 958818 - 960674 | 69466.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN05443550_102184 | Not Available | Positive | 960812 - 962623 | 66227.3 |
| Trna-thr | Not Available | Not Available | Positive | 962744 - 962816 | Not Available |
| isopenicillin n synthase | SAMN05443550_102186 | Not Available | Negative | 963123 - 964127 | 37846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
