Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05443550_10166 | Not Available | Positive | 59126 - 59842 | 25357.7 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05443550_10167 | Not Available | Positive | 59844 - 60500 | 24186.9 |
| hypothetical protein | SAMN05443550_10168 | Not Available | Negative | 60692 - 61993 | 45076.2 |
| peroxiredoxin | SAMN05443550_10169 | Not Available | Positive | 62150 - 62866 | 26145.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05443550_10170 | Not Available | Positive | 63065 - 63853 | 28515.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443550_10171 | Not Available | Positive | 64063 - 64656 | 22978.2 |
| hypothetical protein | SAMN05443550_10172 | Not Available | Positive | 64667 - 64954 | 11051.6 |
| transcriptional regulator, hxlr family | SAMN05443550_10173 | Not Available | Negative | 65041 - 65478 | 16602.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05443550_10174 | Not Available | Positive | 65551 - 66345 | 28324.3 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05443550_10175 | Not Available | Negative | 67384 - 68049 | 25397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
