Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05443550_102157 | Not Available | Positive | 930473 - 931075 | 21719.3 |
| bacillithiol system protein ytxj | SAMN05443550_102158 | Not Available | Positive | 931343 - 931675 | 12540.9 |
| lipoic acid synthetase | SAMN05443550_102159 | Not Available | Positive | 931749 - 932627 | 33014.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443550_102160 | Not Available | Positive | 932690 - 933241 | 20933.3 |
| anti-sigma-k factor rska | SAMN05443550_102161 | Not Available | Positive | 933242 - 934087 | 30638.0 |
| nad(p)h-hydrate epimerase | SAMN05443550_102162 | Not Available | Negative | 934080 - 935570 | 53221.6 |
| excinuclease abc subunit a | SAMN05443550_102163 | Not Available | Negative | 935712 - 938561 | 106298.0 |
| transglycosylase slt domain-containing protein | SAMN05443550_102164 | Not Available | Negative | 938747 - 939532 | 29614.3 |
| hypothetical protein | SAMN05443550_102165 | Not Available | Negative | 939557 - 939727 | 6592.27 |
| 23s rrna pseudouridine2605 synthase | SAMN05443550_102166 | Not Available | Positive | 939752 - 941287 | 57150.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
