Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminopeptidase frvx | SAMN05443550_10277 | Not Available | Positive | 849744 - 850859 | 41488.5 |
| nucleotidyl transferase | SAMN05443550_10278 | Not Available | Positive | 850965 - 851864 | 34106.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443550_10279 | Not Available | Negative | 851955 - 852527 | 22681.3 |
| fecr family protein | SAMN05443550_10280 | Not Available | Positive | 852738 - 853883 | 42736.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05443550_10281 | Not Available | Positive | 853938 - 857345 | 125250.0 |
| starch-binding associating with outer membrane | SAMN05443550_10282 | Not Available | Positive | 857369 - 858874 | 56296.4 |
| molecular chaperone dnak | SAMN05443550_10283 | Not Available | Negative | 858945 - 860858 | 68087.5 |
| methyltransferase domain-containing protein | SAMN05443550_10284 | Not Available | Negative | 861043 - 862227 | 44576.8 |
| lsu ribosomal protein l17p | SAMN05443550_10285 | Not Available | Negative | 862315 - 862875 | 20578.4 |
| dna-directed rna polymerase subunit alpha | SAMN05443550_10286 | Not Available | Negative | 862957 - 863949 | 37225.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
