Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN05443550_10237 | Not Available | Positive | 803255 - 804346 | 39774.6 |
| enolase | SAMN05443550_10238 | Not Available | Positive | 804456 - 805748 | 46700.6 |
| septum formation initiator | SAMN05443550_10239 | Not Available | Positive | 805857 - 806156 | 12037.3 |
| hypothetical protein | SAMN05443550_10240 | Not Available | Negative | 806163 - 808247 | 77380.7 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05443550_10241 | Not Available | Negative | 808323 - 809066 | 26467.9 |
| agmatine deiminase | SAMN05443550_10242 | Not Available | Negative | 809157 - 810212 | 39428.6 |
| n-carbamoylputrescine amidase | SAMN05443550_10243 | Not Available | Negative | 810196 - 811071 | 32739.6 |
| cysteine-rich cwc | SAMN05443550_10244 | Not Available | Negative | 811166 - 811375 | 7905.45 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN05443550_10245 | Not Available | Negative | 811453 - 813831 | 89283.4 |
| ribonucleoside-diphosphate reductase beta chain | SAMN05443550_10246 | Not Available | Negative | 813949 - 814920 | 37206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
