Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05443550_101708 | Not Available | Negative | 766275 - 769598 | 122743.0 |
| fecr family protein | SAMN05443550_101709 | Not Available | Negative | 769734 - 770927 | 44842.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443550_101710 | Not Available | Negative | 770965 - 771585 | 24301.7 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 771977 - 772052 | 18.01 |
| hypothetical protein | SAMN05443550_1021 | Not Available | Negative | 772389 - 772769 | 14882.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443550_1022 | Not Available | Positive | 773215 - 773763 | 21723.1 |
| hypothetical protein | SAMN05443550_1023 | Not Available | Positive | 773783 - 774313 | 20948.8 |
| uncharacterised protein family (upf0175) | SAMN05443550_1024 | Not Available | Positive | 774489 - 774725 | 8656.19 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN05443550_1025 | Not Available | Positive | 774697 - 775176 | 17880.0 |
| phage integrase sam-like domain-containing protein | SAMN05443550_1026 | Not Available | Negative | 775250 - 776611 | 52843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
