Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443550_101668 | Not Available | Positive | 717624 - 717782 | 5777.37 |
| l-lysine 6-transaminase precursor | SAMN05443550_101669 | Not Available | Positive | 717764 - 719095 | 50142.2 |
| hypothetical protein | SAMN05443550_101670 | Not Available | Positive | 719092 - 719496 | 15065.2 |
| peroxiredoxin | SAMN05443550_101671 | Not Available | Negative | 719602 - 720741 | 40944.1 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN05443550_101672 | Not Available | Negative | 720836 - 721552 | 26646.7 |
| glutathione peroxidase | SAMN05443550_101673 | Not Available | Negative | 721631 - 722128 | 18924.9 |
| protein of unknown function | SAMN05443550_101674 | Not Available | Negative | 722131 - 722769 | 24977.2 |
| gtp pyrophosphokinase | SAMN05443550_101675 | Not Available | Positive | 722861 - 725068 | 83665.2 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05443550_101676 | Not Available | Positive | 725132 - 725620 | 19044.8 |
| adenylosuccinate synthetase | SAMN05443550_101677 | Not Available | Positive | 725736 - 727013 | 46900.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
