Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN05443550_101658 | Not Available | Negative | 704666 - 706108 | 55393.2 |
| l-2,4-diaminobutyrate decarboxylase | SAMN05443550_101659 | Not Available | Negative | 706083 - 707612 | 57026.0 |
| nitroreductase | SAMN05443550_101660 | Not Available | Negative | 707634 - 708260 | 24023.7 |
| taurine catabolism dioxygenase taud, tfda family | SAMN05443550_101661 | Not Available | Positive | 708553 - 709647 | 41098.1 |
| siderophore synthetase component | SAMN05443550_101662 | Not Available | Positive | 709672 - 711513 | 70527.8 |
| siderophore synthetase component | SAMN05443550_101663 | Not Available | Positive | 711553 - 713397 | 70816.5 |
| iron complex outermembrane recepter protein | SAMN05443550_101664 | Not Available | Positive | 713430 - 715829 | 88750.9 |
| uncharacterized membrane protein | SAMN05443550_101665 | Not Available | Positive | 715991 - 717142 | 44011.6 |
| hypothetical protein | SAMN05443550_101666 | Not Available | Positive | 717183 - 717377 | 7332.0 |
| hypothetical protein | SAMN05443550_101667 | Not Available | Positive | 717451 - 717597 | 5617.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
