Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | SAMN05443550_101638 | Not Available | Negative | 683359 - 684663 | 48480.9 |
| lipoprotein-releasing system permease protein | SAMN05443550_101639 | Not Available | Negative | 685045 - 686265 | 46124.5 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN05443550_101640 | Not Available | Positive | 686346 - 687614 | 46634.6 |
| hypothetical protein | SAMN05443550_101641 | Not Available | Positive | 687630 - 687845 | 8194.41 |
| hypothetical protein | SAMN05443550_101642 | Not Available | Positive | 688124 - 688510 | 14904.9 |
| dna topoisomerase-1 | SAMN05443550_101643 | Not Available | Negative | 688561 - 689613 | 40043.2 |
| methionyl-trna formyltransferase | SAMN05443550_101644 | Not Available | Positive | 689673 - 690581 | 33418.4 |
| branched-chain amino acid aminotransferase | SAMN05443550_101645 | Not Available | Negative | 690594 - 691433 | 31555.1 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05443550_101646 | Not Available | Negative | 691440 - 692546 | 42032.3 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN05443550_101647 | Not Available | Positive | 692660 - 693535 | 32186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
