Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN05443550_101628 | Not Available | Negative | 674229 - 674774 | 20903.3 |
| putative endopeptidase | SAMN05443550_101629 | Not Available | Positive | 675146 - 677215 | 77340.4 |
| outer membrane protein | SAMN05443550_101630 | Not Available | Negative | 677287 - 677991 | 25361.5 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN05443550_101631 | Not Available | Negative | 678106 - 678450 | 13201.3 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05443550_101632 | Not Available | Positive | 678495 - 679166 | 24655.5 |
| predicted oxidoreductase | SAMN05443550_101633 | Not Available | Positive | 679257 - 680210 | 35484.7 |
| predicted purr-regulated permease perm | SAMN05443550_101634 | Not Available | Positive | 680308 - 681423 | 41488.2 |
| xtp/ditp diphosphohydrolase | SAMN05443550_101635 | Not Available | Positive | 681460 - 682269 | 30861.8 |
| hypothetical protein | SAMN05443550_101636 | Not Available | Negative | 682373 - 682903 | 19272.0 |
| hypothetical protein | SAMN05443550_101637 | Not Available | Negative | 683000 - 683200 | 7404.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
