Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05443550_101568 | Not Available | Negative | 603665 - 604441 | 28817.3 |
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05443550_101569 | Not Available | Negative | 604571 - 606811 | 82034.7 |
| xanthine dehydrogenase yags fad-binding subunit | SAMN05443550_101570 | Not Available | Negative | 606837 - 607856 | 36880.9 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN05443550_101571 | Not Available | Negative | 607849 - 608367 | 18312.1 |
| hypothetical protein | SAMN05443550_101572 | Not Available | Negative | 608454 - 608762 | 11591.5 |
| protein of unknown function | SAMN05443550_101573 | Not Available | Negative | 608941 - 609636 | 27286.6 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05443550_101574 | Not Available | Positive | 609763 - 611079 | 47042.2 |
| outer membrane protein ompa | SAMN05443550_101575 | Not Available | Negative | 611187 - 611648 | 17170.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05443550_101576 | Not Available | Negative | 611620 - 612378 | 27519.3 |
| hypothetical protein | SAMN05443550_101577 | Not Available | Positive | 612553 - 612705 | 5308.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
