Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05443550_101558 | Not Available | Positive | 591143 - 592255 | 41500.8 |
| hypothetical protein | SAMN05443550_101559 | Not Available | Negative | 592520 - 592639 | 4664.78 |
| hypothetical protein | SAMN05443550_101560 | Not Available | Negative | 592649 - 592849 | 7407.62 |
| hypothetical protein | SAMN05443550_101561 | Not Available | Negative | 592846 - 593115 | 10354.8 |
| solute:na+ symporter, sss family | SAMN05443550_101562 | Not Available | Positive | 593207 - 594835 | 59517.1 |
| inositol oxygenase | SAMN05443550_101563 | Not Available | Positive | 594872 - 595744 | 34254.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05443550_101564 | Not Available | Positive | 596066 - 598009 | 72351.0 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05443550_101565 | Not Available | Negative | 598017 - 598871 | 33348.7 |
| acetolactate synthase-1/2/3 large subunit | SAMN05443550_101566 | Not Available | Positive | 599212 - 600762 | 55612.8 |
| pas domain s-box-containing protein | SAMN05443550_101567 | Not Available | Negative | 600778 - 603228 | 91716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
