Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane secretion effector | SAMN05443550_101508 | Not Available | Negative | 539043 - 540293 | 45435.0 |
| lysr family transcriptional regulator, cyn operon transcriptional activator | SAMN05443550_101509 | Not Available | Positive | 540354 - 541226 | 32546.8 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | SAMN05443550_101510 | Not Available | Negative | 541271 - 541921 | 23711.4 |
| signal transduction histidine kinase | SAMN05443550_101511 | Not Available | Negative | 541976 - 543289 | 49868.2 |
| cu+-exporting atpase | SAMN05443550_101512 | Not Available | Positive | 543494 - 545887 | 88381.9 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05443550_101513 | Not Available | Positive | 545884 - 546072 | 7052.41 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN05443550_101514 | Not Available | Positive | 546140 - 548251 | 80136.7 |
| hypothetical protein | SAMN05443550_101515 | Not Available | Positive | 548268 - 548447 | 6770.37 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05443550_101516 | Not Available | Positive | 548431 - 549267 | 30993.6 |
| cytochrome c oxidase accessory protein fixg | SAMN05443550_101517 | Not Available | Positive | 549270 - 550667 | 52852.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
