Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase components of abc transporters with duplicated atpase domains | SAMN05443550_101417 | Not Available | Positive | 450486 - 452108 | 61542.3 |
| hypothetical protein | SAMN05443550_101418 | Not Available | Positive | 452189 - 452377 | 7032.25 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05443550_101419 | Not Available | Positive | 452520 - 452951 | 16312.9 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN05443550_101420 | Not Available | Negative | 453017 - 453517 | 17987.9 |
| lysozyme | SAMN05443550_101421 | Not Available | Negative | 453740 - 454666 | 35364.1 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05443550_101422 | Not Available | Negative | 454710 - 456080 | 50526.4 |
| hypothetical protein | SAMN05443550_101423 | Not Available | Positive | 456439 - 456819 | 14483.3 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05443550_101424 | Not Available | Positive | 456915 - 459221 | 87419.1 |
| protein of unknown function | SAMN05443550_101425 | Not Available | Positive | 459308 - 459994 | 26336.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05443550_101426 | Not Available | Positive | 460032 - 461357 | 48208.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
