Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05443550_101366 | Not Available | Positive | 392343 - 392735 | 14033.2 |
| aspartate aminotransferase | SAMN05443550_101367 | Not Available | Positive | 392832 - 394001 | 43275.9 |
| hypothetical protein | SAMN05443550_101368 | Not Available | Negative | 394106 - 395260 | 44613.8 |
| dna-binding transcriptional regulator, marr family | SAMN05443550_101369 | Not Available | Positive | 395544 - 395972 | 16316.8 |
| nicotinamidase-related amidase | SAMN05443550_101370 | Not Available | Positive | 395988 - 396590 | 21831.3 |
| major facilitator superfamily protein | SAMN05443550_101371 | Not Available | Positive | 396591 - 397961 | 49628.8 |
| atp-binding cassette, subfamily b | SAMN05443550_101372 | Not Available | Negative | 397947 - 399731 | 67393.3 |
| php domain-containing protein | SAMN05443550_101373 | Not Available | Positive | 400400 - 401629 | 44285.1 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN05443550_101374 | Not Available | Negative | 401643 - 402251 | 23118.7 |
| hypothetical protein | SAMN05443550_101375 | Not Available | Positive | 402357 - 402887 | 20313.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
