Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | SAMN05443550_101356 | Not Available | Positive | 377213 - 378280 | 39550.2 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05443550_101357 | Not Available | Positive | 378270 - 379175 | 35564.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN05443550_101358 | Not Available | Positive | 379485 - 381812 | 86307.6 |
| protein of unknown function | SAMN05443550_101359 | Not Available | Positive | 381893 - 383122 | 43925.1 |
| uncharacterized iron-regulated membrane protein | SAMN05443550_101360 | Not Available | Positive | 383154 - 384503 | 50226.4 |
| prephenate dehydratase | SAMN05443550_101361 | Not Available | Positive | 384761 - 385594 | 31320.7 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05443550_101362 | Not Available | Positive | 385659 - 386795 | 41879.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05443550_101363 | Not Available | Positive | 386858 - 388120 | 45672.4 |
| chorismate synthase | SAMN05443550_101364 | Not Available | Positive | 388133 - 389224 | 38919.3 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN05443550_101365 | Not Available | Negative | 389789 - 392212 | 90167.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
