Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN05443550_101336 | Not Available | Negative | 358161 - 358802 | 24258.8 |
| thioredoxin | SAMN05443550_101337 | Not Available | Negative | 358807 - 359295 | 18046.7 |
| thiol:disulfide interchange protein dsbd | SAMN05443550_101338 | Not Available | Negative | 359304 - 361283 | 71351.6 |
| peroxiredoxin q/bcp | SAMN05443550_101339 | Not Available | Negative | 361461 - 362012 | 20264.4 |
| hypothetical protein | SAMN05443550_101340 | Not Available | Positive | 362317 - 362502 | 6238.5 |
| predicted arabinose efflux permease, mfs family | SAMN05443550_101341 | Not Available | Negative | 362632 - 363849 | 44772.2 |
| arac-type dna-binding protein | SAMN05443550_101342 | Not Available | Negative | 363982 - 364875 | 35175.1 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05443550_101343 | Not Available | Positive | 365067 - 366455 | 50479.6 |
| protein atu4866 | SAMN05443550_101344 | Not Available | Positive | 366554 - 366796 | 9475.94 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05443550_101345 | Not Available | Positive | 367193 - 367792 | 23512.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
