Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN05443550_101286 | Not Available | Negative | 308870 - 309256 | 14335.9 |
| hypothetical protein | SAMN05443550_101287 | Not Available | Positive | 309350 - 310939 | 59839.8 |
| hypothetical protein | SAMN05443550_101288 | Not Available | Positive | 311042 - 312469 | 54021.6 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN05443550_101289 | Not Available | Negative | 312466 - 313152 | 24836.8 |
| hypothetical protein | SAMN05443550_101290 | Not Available | Negative | 313176 - 313406 | 8768.88 |
| ribonuclease p protein component | SAMN05443550_101291 | Not Available | Negative | 313393 - 313788 | 15383.9 |
| two component transcriptional regulator, lyttr family | SAMN05443550_101292 | Not Available | Negative | 314140 - 314874 | 27934.8 |
| histidine kinase | SAMN05443550_101293 | Not Available | Negative | 314852 - 315898 | 39608.5 |
| hypothetical protein | SAMN05443550_101294 | Not Available | Negative | 315924 - 316688 | 27965.1 |
| uncharacterized iron-regulated protein | SAMN05443550_101295 | Not Available | Positive | 316841 - 317698 | 32090.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
