Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN05443550_1017 | Not Available | Positive | 6070 - 6999 | 35650.8 |
| transcriptional regulator, hxlr family | SAMN05443550_1018 | Not Available | Negative | 7383 - 7739 | 13621.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05443550_1019 | Not Available | Positive | 7931 - 8695 | 27175.3 |
| hypothetical protein | SAMN05443550_10110 | Not Available | Positive | 8746 - 9069 | 12011.0 |
| hypothetical protein | SAMN05443550_10111 | Not Available | Positive | 9313 - 9744 | 16583.1 |
| hypothetical protein | SAMN05443550_10112 | Not Available | Positive | 9781 - 10068 | 10730.3 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05443550_10113 | Not Available | Negative | 10239 - 11060 | 30333.6 |
| cupin domain protein | SAMN05443550_10114 | Not Available | Negative | 11092 - 11589 | 17862.3 |
| hypothetical protein | SAMN05443550_10115 | Not Available | Negative | 11602 - 11742 | 5388.69 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN05443550_10116 | Not Available | Negative | 12138 - 12608 | 17544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
