Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN05443550_101226 | Not Available | Positive | 238140 - 239312 | 43469.3 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05443550_101227 | Not Available | Positive | 239312 - 240280 | 36062.7 |
| response regulator receiver domain-containing protein | SAMN05443550_101228 | Not Available | Negative | 240286 - 241251 | 37195.8 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05443550_101229 | Not Available | Positive | 241438 - 241806 | 14175.9 |
| large subunit ribosomal protein l27 | SAMN05443550_101230 | Not Available | Negative | 241872 - 242294 | 14733.8 |
| lsu ribosomal protein l21p | SAMN05443550_101231 | Not Available | Negative | 242353 - 242664 | 11308.9 |
| hypothetical protein | SAMN05443550_101232 | Not Available | Negative | 242748 - 243257 | 19819.8 |
| na+/h+-dicarboxylate symporter | SAMN05443550_101233 | Not Available | Negative | 243276 - 244661 | 50340.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443550_101234 | Not Available | Positive | 244806 - 245303 | 19470.3 |
| hypothetical protein | SAMN05443550_101235 | Not Available | Positive | 245290 - 245889 | 23168.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
