Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase (ferredoxin) | SAMN05443550_101166 | Not Available | Negative | 173771 - 175864 | 78160.0 |
| muts domain v | SAMN05443550_101167 | Not Available | Positive | 176341 - 177999 | 62723.9 |
| start domain-containing protein | SAMN05443550_101168 | Not Available | Negative | 177996 - 178658 | 25185.6 |
| l,d-transpeptidase catalytic domain | SAMN05443550_101169 | Not Available | Positive | 178805 - 179707 | 32904.5 |
| l,d-transpeptidase catalytic domain | SAMN05443550_101170 | Not Available | Negative | 180003 - 181562 | 59374.2 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN05443550_101171 | Not Available | Positive | 181665 - 182708 | 37653.9 |
| exonuclease sbcc | SAMN05443550_101172 | Not Available | Negative | 182820 - 186485 | 138134.0 |
| exodeoxyribonuclease i subunit d | SAMN05443550_101173 | Not Available | Negative | 186482 - 187708 | 46354.3 |
| hypothetical protein | SAMN05443550_101174 | Not Available | Negative | 187768 - 188187 | 15435.5 |
| hypothetical protein | SAMN05443550_101175 | Not Available | Negative | 188269 - 188601 | 12260.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
