Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05443550_10186 | Not Available | Positive | 80976 - 82064 | 41480.1 |
| hypothetical protein | SAMN05443550_10187 | Not Available | Positive | 82207 - 83574 | 50973.8 |
| membrane dipeptidase | SAMN05443550_10188 | Not Available | Positive | 83635 - 84903 | 46731.5 |
| two component regulator propeller | SAMN05443550_10189 | Not Available | Negative | 85007 - 88978 | 150199.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05443550_10190 | Not Available | Positive | 89183 - 92191 | 109437.0 |
| starch-binding associating with outer membrane | SAMN05443550_10191 | Not Available | Positive | 92201 - 93814 | 61864.8 |
| bnr repeat-like domain-containing protein | SAMN05443550_10192 | Not Available | Positive | 93834 - 95900 | 76078.7 |
| endonuclease g | SAMN05443550_10193 | Not Available | Positive | 96342 - 96869 | 18923.6 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05443550_10194 | Not Available | Positive | 97334 - 98242 | 34496.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05443550_10195 | Not Available | Positive | 99118 - 99621 | 19629.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
