Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | SAMN05421820_10251 | Not Available | Negative | 1088944 - 1090389 | 53919.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_10252 | Not Available | Positive | 1090535 - 1091137 | 23109.0 |
| arac-type dna-binding protein | SAMN05421820_10253 | Not Available | Negative | 1091114 - 1091968 | 33773.9 |
| 6-phospho-3-hexuloisomerase | SAMN05421820_10254 | Not Available | Positive | 1092144 - 1092719 | 20479.0 |
| 3-hexulose-6-phosphate synthase | SAMN05421820_10255 | Not Available | Positive | 1092761 - 1093396 | 21293.9 |
| helix-turn-helix domain-containing protein | SAMN05421820_10256 | Not Available | Positive | 1093542 - 1094510 | 37189.6 |
| hypothetical protein | SAMN05421820_10257 | Not Available | Positive | 1094571 - 1094849 | 10037.3 |
| uncharacterized protein | SAMN05421820_10258 | Not Available | Positive | 1094926 - 1096104 | 45533.1 |
| planctomycete cytochrome c | SAMN05421820_10259 | Not Available | Positive | 1096215 - 1098533 | 87475.0 |
| protein of unknown function | SAMN05421820_10260 | Not Available | Positive | 1098537 - 1099988 | 53870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

