Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 1079717 - 1079787 | Not Available |
| glucosylceramidase | SAMN05421820_10242 | Not Available | Positive | 1080116 - 1081969 | 66446.9 |
| glycosyl hydrolases family 16 | SAMN05421820_10243 | Not Available | Positive | 1081998 - 1083194 | 44020.8 |
| hypothetical protein | SAMN05421820_10244 | Not Available | Positive | 1083206 - 1084108 | 34239.7 |
| rrf2 family protein | SAMN05421820_10245 | Not Available | Negative | 1084112 - 1084576 | 17008.7 |
| fes assembly suf system protein | SAMN05421820_10246 | Not Available | Negative | 1084812 - 1085126 | 11801.3 |
| cysteine desulfuration protein sufe | SAMN05421820_10247 | Not Available | Negative | 1085130 - 1085573 | 16766.5 |
| cysteine desulfurase / selenocysteine lyase | SAMN05421820_10248 | Not Available | Negative | 1085573 - 1086817 | 45235.6 |
| fe-s cluster assembly protein sufd | SAMN05421820_10249 | Not Available | Negative | 1086819 - 1088123 | 48411.3 |
| fe-s cluster assembly atp-binding protein | SAMN05421820_10250 | Not Available | Negative | 1088151 - 1088915 | 28258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

