Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05421820_10211 | Not Available | Positive | 1053343 - 1053837 | 18369.4 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN05421820_10212 | Not Available | Positive | 1053855 - 1054232 | 14367.2 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN05421820_10213 | Not Available | Negative | 1054229 - 1054933 | 25942.5 |
| transcription termination factor rho | SAMN05421820_10214 | Not Available | Negative | 1054954 - 1056639 | 62657.3 |
| hypothetical protein | SAMN05421820_10215 | Not Available | Positive | 1056682 - 1056798 | 4719.72 |
| orotidine-5'-phosphate decarboxylase | SAMN05421820_10216 | Not Available | Positive | 1056912 - 1057742 | 30772.9 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421820_10217 | Not Available | Positive | 1057739 - 1058641 | 33781.5 |
| protein of unknown function | SAMN05421820_10218 | Not Available | Positive | 1058680 - 1059960 | 49924.2 |
| phage shock protein c (pspc) family protein | SAMN05421820_10219 | Not Available | Positive | 1059962 - 1060186 | 8894.13 |
| ankyrin repeat-containing protein | SAMN05421820_10220 | Not Available | Negative | 1060183 - 1060833 | 23310.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

