Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1042622 - 1042706 | Not Available |
| trigger factor | SAMN05421820_1022 | Not Available | Positive | 1042999 - 1044345 | 51334.1 |
| atp-dependent clp protease, protease subunit | SAMN05421820_1023 | Not Available | Positive | 1044573 - 1045274 | 25977.2 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05421820_1024 | Not Available | Positive | 1045267 - 1046508 | 45937.8 |
| amp nucleosidase | SAMN05421820_1025 | Not Available | Positive | 1046668 - 1047528 | 31621.3 |
| phosphohistidine phosphatase | SAMN05421820_1026 | Not Available | Negative | 1047525 - 1048028 | 18883.4 |
| adp-heptose:lps heptosyltransferase | SAMN05421820_1027 | Not Available | Negative | 1047988 - 1049052 | 40212.0 |
| protein of unknown function | SAMN05421820_1028 | Not Available | Negative | 1049056 - 1049658 | 23407.8 |
| dna polymerase (family 10) | SAMN05421820_1029 | Not Available | Negative | 1049678 - 1051354 | 62342.7 |
| protease-4 | SAMN05421820_10210 | Not Available | Negative | 1051510 - 1053285 | 64805.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

