Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_101874 | Not Available | Positive | 1021093 - 1022073 | 35998.2 |
| serine/threonine protein phosphatase prpc | SAMN05421820_101875 | Not Available | Positive | 1022060 - 1022920 | 32714.9 |
| protein kinase domain-containing protein | SAMN05421820_101876 | Not Available | Positive | 1022921 - 1024735 | 68754.2 |
| hypothetical protein | SAMN05421820_101877 | Not Available | Positive | 1024723 - 1025337 | 22984.4 |
| protein of unknown function | SAMN05421820_101878 | Not Available | Positive | 1025387 - 1026697 | 50276.9 |
| crispr-associated endonuclease csn1 | SAMN05421820_101879 | Not Available | Positive | 1027225 - 1031520 | 165862.0 |
| crisp-associated protein cas1 | SAMN05421820_101880 | Not Available | Positive | 1031579 - 1032538 | 36266.6 |
| crispr-associated protein cas2 | SAMN05421820_101881 | Not Available | Positive | 1032607 - 1032936 | 13014.0 |
| hypothetical protein | SAMN05421820_101882 | Not Available | Positive | 1040905 - 1041021 | 4475.34 |
| pd-(d/e)xk nuclease superfamily protein | SAMN05421820_101883 | Not Available | Negative | 1040998 - 1042029 | 40782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

