Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | SAMN05421820_101815 | Not Available | Negative | 955641 - 957869 | 83327.1 |
| hypothetical protein | SAMN05421820_101816 | Not Available | Positive | 958271 - 959026 | 28639.9 |
| planctomycete cytochrome c | SAMN05421820_101817 | Not Available | Positive | 959403 - 962618 | 121133.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421820_101818 | Not Available | Positive | 962623 - 964143 | 56635.4 |
| uncharacterized membrane protein | SAMN05421820_101819 | Not Available | Positive | 964140 - 965480 | 49814.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101820 | Not Available | Positive | 965895 - 969020 | 112174.0 |
| starch-binding associating with outer membrane | SAMN05421820_101821 | Not Available | Positive | 969036 - 970514 | 54347.8 |
| alginate lyase | SAMN05421820_101822 | Not Available | Positive | 970525 - 971721 | 45302.4 |
| hypothetical protein | SAMN05421820_101823 | Not Available | Positive | 971732 - 972997 | 47318.6 |
| excinuclease abc, a subunit | SAMN05421820_101824 | Not Available | Negative | 972998 - 975247 | 83755.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

