Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | SAMN05421820_10164 | Not Available | Positive | 90837 - 93002 | 82231.9 |
| glycosyl hydrolases family 28 | SAMN05421820_10165 | Not Available | Positive | 93009 - 94373 | 48842.5 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421820_10166 | Not Available | Negative | 94363 - 94863 | 19268.4 |
| histidine kinase | SAMN05421820_10167 | Not Available | Positive | 94934 - 96133 | 46153.2 |
| two-component system, lytt family, response regulator | SAMN05421820_10168 | Not Available | Positive | 96130 - 96849 | 27365.4 |
| hypothetical protein | SAMN05421820_10169 | Not Available | Positive | 96915 - 98642 | 65323.6 |
| duf218 domain-containing protein | SAMN05421820_10170 | Not Available | Negative | 98639 - 99328 | 26126.6 |
| surface antigen | SAMN05421820_10171 | Not Available | Positive | 99724 - 102255 | 96478.7 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421820_10172 | Not Available | Positive | 102334 - 102525 | 6960.24 |
| murein l,d-transpeptidase ycbb/ykud | SAMN05421820_10173 | Not Available | Negative | 102660 - 104306 | 63260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

