Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | SAMN05421820_101775 | Not Available | Positive | 917019 - 918830 | 66642.5 |
| hypothetical protein | SAMN05421820_101776 | Not Available | Positive | 918949 - 919293 | 13335.8 |
| hypothetical protein | SAMN05421820_101777 | Not Available | Positive | 919338 - 920321 | 36427.4 |
| putative lumazine-binding | SAMN05421820_101778 | Not Available | Negative | 920335 - 920787 | 17486.2 |
| transcriptional regulator, contains xre-family hth domain | SAMN05421820_101779 | Not Available | Negative | 920907 - 921704 | 30140.6 |
| protein imua | SAMN05421820_101780 | Not Available | Positive | 921779 - 922513 | 26749.3 |
| protein imub | SAMN05421820_101781 | Not Available | Positive | 922515 - 924011 | 56369.6 |
| error-prone dna polymerase | SAMN05421820_101782 | Not Available | Positive | 924036 - 927197 | 119322.0 |
| hypothetical protein | SAMN05421820_101783 | Not Available | Negative | 927219 - 927779 | 20808.2 |
| hypothetical protein | SAMN05421820_101784 | Not Available | Positive | 927981 - 929183 | 46095.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

