Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05421820_101745 | Not Available | Negative | 877673 - 878470 | 30445.9 |
| iron complex outermembrane recepter protein | SAMN05421820_101746 | Not Available | Positive | 879156 - 882560 | 124709.0 |
| starch-binding associating with outer membrane | SAMN05421820_101747 | Not Available | Positive | 882584 - 884284 | 64211.4 |
| protein of unknown function | SAMN05421820_101748 | Not Available | Negative | 884425 - 885396 | 36888.0 |
| hypothetical protein | SAMN05421820_101749 | Not Available | Positive | 885565 - 886488 | 35751.7 |
| hypothetical protein | SAMN05421820_101750 | Not Available | Positive | 886511 - 887035 | 19485.4 |
| morn repeat variant | SAMN05421820_101751 | Not Available | Positive | 887052 - 888254 | 46038.1 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN05421820_101752 | Not Available | Positive | 888298 - 890529 | 85169.1 |
| antitoxin component ywqk of the ywqjk toxin-antitoxin module | SAMN05421820_101753 | Not Available | Positive | 890541 - 891320 | 29640.9 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05421820_101754 | Not Available | Negative | 891332 - 892354 | 38068.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

