Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_101695 | Not Available | Negative | 830441 - 831703 | 47768.8 |
| uncharacterized conserved protein | SAMN05421820_101696 | Not Available | Negative | 831720 - 832058 | 12544.0 |
| uncharacterized conserved protein (cog2071) | SAMN05421820_101697 | Not Available | Positive | 832153 - 832872 | 27034.1 |
| hypothetical protein | SAMN05421820_101698 | Not Available | Negative | 832932 - 833333 | 14662.3 |
| aspartate racemase | SAMN05421820_101699 | Not Available | Negative | 833516 - 834217 | 25739.8 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05421820_101700 | Not Available | Positive | 834406 - 835842 | 53131.9 |
| hypothetical protein | SAMN05421820_101701 | Not Available | Positive | 835911 - 836897 | 37918.7 |
| hypothetical protein | SAMN05421820_101702 | Not Available | Positive | 836903 - 837607 | 26606.2 |
| hypothetical protein | SAMN05421820_101703 | Not Available | Positive | 837689 - 838378 | 26204.9 |
| peroxiredoxin | SAMN05421820_101704 | Not Available | Positive | 838375 - 839532 | 43435.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

