Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_101665 | Not Available | Positive | 801246 - 801611 | 13963.2 |
| 5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | SAMN05421820_101666 | Not Available | Negative | 801686 - 802567 | 31640.6 |
| gtp-binding protein lepa | SAMN05421820_101667 | Not Available | Negative | 802623 - 804410 | 66736.2 |
| alpha-1,2-mannosidase, putative | SAMN05421820_101668 | Not Available | Negative | 804441 - 807374 | 109765.0 |
| copper homeostasis protein | SAMN05421820_101669 | Not Available | Negative | 807383 - 808114 | 26450.2 |
| n4-(beta-n-acetylglucosaminyl)-l-asparaginase | SAMN05421820_101670 | Not Available | Negative | 808142 - 809176 | 36860.6 |
| predicted amidohydrolase | SAMN05421820_101671 | Not Available | Negative | 809203 - 810006 | 31133.2 |
| methionine aminotransferase | SAMN05421820_101672 | Not Available | Negative | 810031 - 811176 | 43105.3 |
| hypothetical protein | SAMN05421820_101673 | Not Available | Positive | 811244 - 812011 | 28466.6 |
| res domain-containing protein | SAMN05421820_101674 | Not Available | Negative | 812017 - 812466 | 17113.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

