Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l13 | SAMN05421820_1271 | Not Available | Positive | 8022606 - 8023049 | 16292.9 |
| small subunit ribosomal protein s9 | SAMN05421820_1272 | Not Available | Positive | 8023066 - 8023452 | 14267.5 |
| small subunit ribosomal protein s2 | SAMN05421820_1273 | Not Available | Positive | 8023472 - 8024296 | 30434.8 |
| elongation factor ts | SAMN05421820_1274 | Not Available | Positive | 8024397 - 8025236 | 30161.9 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05421820_1275 | Not Available | Negative | 8025477 - 8026511 | 39451.5 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN05421820_1276 | Not Available | Negative | 8026501 - 8026854 | 13119.8 |
| Trna-ala | Not Available | Not Available | Positive | 8031060 - 8031136 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 8031151 - 8031225 | Not Available |
| surfactin family lipopeptide synthetase a/fengycin family lipopeptide synthetase d | SAMN05421820_1291 | Not Available | Negative | 8033107 - 8036178 | 115852.0 |
| hypothetical protein | SAMN05421820_1301 | Not Available | Positive | 8037123 - 8037680 | 21000.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

