Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_1245 | Not Available | Negative | 8003677 - 8004642 | 37249.0 |
| aspartyl/asparaginyl beta-hydroxylase | SAMN05421820_1246 | Not Available | Negative | 8004652 - 8005344 | 26458.2 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05421820_1247 | Not Available | Negative | 8005383 - 8006273 | 32682.2 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421820_1248 | Not Available | Negative | 8006308 - 8007533 | 42716.3 |
| phosphopantetheine attachment site | SAMN05421820_1251 | Not Available | Positive | 8007534 - 8009580 | 77702.4 |
| amino acid adenylation domain-containing protein | SAMN05421820_1252 | Not Available | Positive | 8009593 - 8013000 | 126226.0 |
| carbamoyltransferase | SAMN05421820_1253 | Not Available | Positive | 8013060 - 8014799 | 64873.3 |
| condensation domain-containing protein | SAMN05421820_1254 | Not Available | Positive | 8014910 - 8015319 | 15321.6 |
| putative pyridoxal-dependent aspartate 1-decarboxylase | SAMN05421820_1261 | Not Available | Positive | 8015320 - 8020427 | 193346.0 |
| ketoacyl-synthetase c-terminal extension | SAMN05421820_1262 | Not Available | Positive | 8020432 - 8022139 | 62114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

