Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05421820_12122 | Not Available | Negative | 7936156 - 7937028 | 31273.9 |
| dna-binding protein hu-beta | SAMN05421820_12123 | Not Available | Negative | 7937037 - 7937339 | 11089.5 |
| a/g-specific adenine glycosylase | SAMN05421820_12124 | Not Available | Positive | 7937512 - 7938564 | 40293.3 |
| single-strand binding protein | SAMN05421820_12125 | Not Available | Positive | 7938576 - 7939004 | 16080.0 |
| dinb superfamily protein | SAMN05421820_12126 | Not Available | Positive | 7939007 - 7939495 | 18799.2 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN05421820_12127 | Not Available | Negative | 7939575 - 7941413 | 67637.7 |
| protein of unknown function | SAMN05421820_12128 | Not Available | Negative | 7941488 - 7942966 | 53654.6 |
| starch synthase | SAMN05421820_12129 | Not Available | Negative | 7943020 - 7943919 | 34735.9 |
| pantoate--beta-alanine ligase | SAMN05421820_12130 | Not Available | Positive | 7944086 - 7944838 | 28086.0 |
| l-aspartate 1-decarboxylase | SAMN05421820_12131 | Not Available | Positive | 7944883 - 7945233 | 12988.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

