Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN05421820_1208 | Not Available | Negative | 7882629 - 7884980 | 87733.2 |
| putative abc transport system atp-binding protein | SAMN05421820_1209 | Not Available | Negative | 7884989 - 7885687 | 26168.6 |
| hlyd family secretion protein | SAMN05421820_12010 | Not Available | Negative | 7885792 - 7887036 | 46601.0 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421820_12011 | Not Available | Positive | 7887337 - 7888707 | 51469.5 |
| pas domain-containing protein | SAMN05421820_12012 | Not Available | Positive | 7888704 - 7890065 | 52311.9 |
| glucose-1-phosphate adenylyltransferase | SAMN05421820_12013 | Not Available | Negative | 7890070 - 7891344 | 47179.7 |
| starch synthase | SAMN05421820_12014 | Not Available | Negative | 7891359 - 7892765 | 53189.9 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05421820_12015 | Not Available | Positive | 7893333 - 7894319 | 37063.6 |
| dj-1/pfpi family protein | SAMN05421820_12016 | Not Available | Positive | 7894422 - 7895138 | 26147.9 |
| sulfate adenylyltransferase subunit 1 | SAMN05421820_12017 | Not Available | Negative | 7895313 - 7896563 | 46650.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

