Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN05421820_11935 | Not Available | Positive | 7868607 - 7870145 | 55476.3 |
| hypothetical protein | SAMN05421820_11936 | Not Available | Negative | 7870491 - 7871315 | 30736.8 |
| peroxiredoxin | SAMN05421820_11937 | Not Available | Positive | 7871726 - 7872946 | 45838.5 |
| Trna-leu | Not Available | Not Available | Positive | 7873267 - 7873351 | Not Available |
| abc-type fe3+-hydroxamate transport system, substrate-binding protein | SAMN05421820_1202 | Not Available | Negative | 7873518 - 7874315 | 30526.0 |
| ftsx-like permease family protein | SAMN05421820_1203 | Not Available | Negative | 7874449 - 7874661 | 7561.62 |
| abc-type lipoprotein export system, atpase component | SAMN05421820_1204 | Not Available | Negative | 7874693 - 7875382 | 25562.1 |
| duplicated orphan permease | SAMN05421820_1205 | Not Available | Negative | 7875416 - 7877815 | 90206.7 |
| putative abc transport system permease protein | SAMN05421820_1206 | Not Available | Negative | 7877836 - 7880214 | 88726.6 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05421820_1207 | Not Available | Negative | 7880239 - 7882614 | 88717.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

