Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | SAMN05421820_11915 | Not Available | Negative | 7844328 - 7845497 | 41820.2 |
| glucosamine-6-phosphate deaminase | SAMN05421820_11916 | Not Available | Positive | 7845786 - 7847705 | 72412.4 |
| predicted acyltransferase | SAMN05421820_11917 | Not Available | Positive | 7847767 - 7848924 | 42906.3 |
| zinc protease | SAMN05421820_11918 | Not Available | Positive | 7849039 - 7851897 | 105819.0 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN05421820_11919 | Not Available | Negative | 7851972 - 7853528 | 59367.1 |
| hypothetical protein | SAMN05421820_11920 | Not Available | Positive | 7853715 - 7854623 | 34336.0 |
| hamp domain-containing protein | SAMN05421820_11921 | Not Available | Negative | 7854615 - 7858331 | 142803.0 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05421820_11922 | Not Available | Negative | 7858339 - 7859235 | 31614.1 |
| gtp cyclohydrolase i | SAMN05421820_11923 | Not Available | Negative | 7859257 - 7859892 | 23784.6 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN05421820_11924 | Not Available | Negative | 7859905 - 7860315 | 15772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

