Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_11862 | Not Available | Negative | 7798654 - 7799772 | 43515.3 |
| rnase hii | SAMN05421820_11863 | Not Available | Negative | 7799875 - 7800486 | 22784.7 |
| peptide/nickel transport system permease protein | SAMN05421820_11864 | Not Available | Negative | 7800511 - 7801602 | 40284.8 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421820_11865 | Not Available | Negative | 7801602 - 7802738 | 42668.2 |
| hypothetical protein | SAMN05421820_11866 | Not Available | Negative | 7802716 - 7803717 | 38882.0 |
| holliday junction endonuclease ruvc | SAMN05421820_11867 | Not Available | Positive | 7803737 - 7804300 | 20743.5 |
| protein of unknown function | SAMN05421820_11868 | Not Available | Negative | 7804359 - 7805213 | 32255.9 |
| hypothetical protein | SAMN05421820_11869 | Not Available | Negative | 7805359 - 7805574 | 7666.66 |
| conserved hypothetical protein | SAMN05421820_11870 | Not Available | Positive | 7805709 - 7807346 | 60634.5 |
| atp synthase f1 subcomplex gamma subunit | SAMN05421820_11871 | Not Available | Negative | 7807400 - 7808284 | 32288.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

