Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-arabinose 1-dehydrogenase, zn-dependent alcohol dehydrogenase family | SAMN05421820_11832 | Not Available | Positive | 7767305 - 7768306 | 36057.5 |
| cupin domain-containing protein | SAMN05421820_11833 | Not Available | Positive | 7768360 - 7768839 | 17651.2 |
| hypothetical protein | SAMN05421820_11834 | Not Available | Negative | 7768890 - 7769711 | 30101.7 |
| rhamnogalacturonyl hydrolase yesr | SAMN05421820_11835 | Not Available | Positive | 7770104 - 7771249 | 43225.7 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421820_11836 | Not Available | Positive | 7771304 - 7772587 | 47125.6 |
| cytochrome c, mono-and diheme variants | SAMN05421820_11837 | Not Available | Positive | 7772595 - 7773029 | 15692.1 |
| gmp synthase-glutamine amidotransferase | SAMN05421820_11838 | Not Available | Negative | 7773039 - 7773734 | 26312.6 |
| hypothetical protein | SAMN05421820_11839 | Not Available | Negative | 7773737 - 7774468 | 27299.3 |
| hypothetical protein | SAMN05421820_11840 | Not Available | Negative | 7774563 - 7774796 | 8190.89 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421820_11841 | Not Available | Positive | 7775342 - 7776235 | 32554.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

