Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_11698 | Not Available | Negative | 7531638 - 7532072 | 16909.4 |
| hypothetical protein | SAMN05421820_11699 | Not Available | Negative | 7532075 - 7534507 | 95100.5 |
| hypothetical protein | SAMN05421820_116100 | Not Available | Negative | 7534519 - 7535511 | 38046.7 |
| hypothetical protein | SAMN05421820_116101 | Not Available | Negative | 7535524 - 7536321 | 30733.7 |
| hypothetical protein | SAMN05421820_116102 | Not Available | Positive | 7536654 - 7538567 | 71396.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_116103 | Not Available | Negative | 7538622 - 7541018 | 89267.3 |
| helix-turn-helix domain-containing protein | SAMN05421820_116104 | Not Available | Negative | 7541184 - 7542245 | 40269.9 |
| glycosyl hydrolase family 63 c-terminal domain-containing protein | SAMN05421820_116105 | Not Available | Positive | 7542373 - 7544982 | 100544.0 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421820_116106 | Not Available | Negative | 7544953 - 7546476 | 56784.4 |
| short-chain dehydrogenase | SAMN05421820_116107 | Not Available | Negative | 7546460 - 7547320 | 32725.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

