Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_11668 | Not Available | Negative | 7502898 - 7503533 | 25147.8 |
| patatin-like phospholipase | SAMN05421820_11669 | Not Available | Positive | 7503584 - 7505269 | 62669.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_11670 | Not Available | Negative | 7505274 - 7506566 | 47789.8 |
| predicted arabinose efflux permease, mfs family | SAMN05421820_11671 | Not Available | Negative | 7506600 - 7507805 | 41676.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05421820_11672 | Not Available | Positive | 7507965 - 7508855 | 34349.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_11673 | Not Available | Positive | 7508867 - 7510690 | 67903.3 |
| hypothetical protein | SAMN05421820_11674 | Not Available | Positive | 7510839 - 7510991 | 6277.62 |
| hypothetical protein | SAMN05421820_11675 | Not Available | Positive | 7511043 - 7511195 | 5699.99 |
| phnb protein | SAMN05421820_11676 | Not Available | Negative | 7511515 - 7511946 | 15937.8 |
| nitric oxide dioxygenase | SAMN05421820_11677 | Not Available | Positive | 7512203 - 7513411 | 45006.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

