Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wd40-like beta propeller repeat | SAMN05421820_11618 | Not Available | Positive | 7440458 - 7441399 | 34601.3 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421820_11619 | Not Available | Positive | 7441477 - 7441803 | 11921.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421820_11620 | Not Available | Negative | 7441829 - 7442380 | 21800.5 |
| hypothetical protein | SAMN05421820_11621 | Not Available | Negative | 7442470 - 7443261 | 30440.4 |
| hypothetical protein | SAMN05421820_11622 | Not Available | Positive | 7443925 - 7446132 | 79503.7 |
| hypothetical protein | SAMN05421820_11623 | Not Available | Positive | 7446157 - 7448481 | 83252.3 |
| lysyl oxidase | SAMN05421820_11624 | Not Available | Positive | 7448486 - 7449790 | 49447.6 |
| atp-dependent rna helicase rhle | SAMN05421820_11625 | Not Available | Positive | 7449845 - 7450975 | 41581.1 |
| doxx-like family protein | SAMN05421820_11626 | Not Available | Positive | 7451114 - 7451497 | 14326.6 |
| protein of unknown function | SAMN05421820_11627 | Not Available | Negative | 7451561 - 7452394 | 31396.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

