Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein (beta-ribbon, cspa family) | SAMN05421820_101595 | Not Available | Negative | 725689 - 725895 | 7411.62 |
| hypothetical protein | SAMN05421820_101596 | Not Available | Positive | 726071 - 726310 | 8924.63 |
| ymgg-like gly-zipper | SAMN05421820_101597 | Not Available | Positive | 726364 - 726840 | 16677.2 |
| hypothetical protein | SAMN05421820_101598 | Not Available | Positive | 727219 - 727590 | 14116.1 |
| response regulator receiver domain-containing protein | SAMN05421820_101599 | Not Available | Positive | 727681 - 728184 | 18894.9 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05421820_101600 | Not Available | Positive | 728184 - 729260 | 41506.8 |
| outer membrane efflux protein | SAMN05421820_101601 | Not Available | Positive | 729291 - 729971 | 25766.1 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN05421820_101602 | Not Available | Positive | 729998 - 732169 | 81918.3 |
| hypothetical protein | SAMN05421820_101603 | Not Available | Positive | 732173 - 733615 | 53933.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_101604 | Not Available | Positive | 733743 - 734936 | 45985.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

