Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_114131 | Not Available | Positive | 7237771 - 7238853 | 43170.5 |
| o-antigen ligase | SAMN05421820_114132 | Not Available | Positive | 7238860 - 7240119 | 47881.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_114133 | Not Available | Positive | 7240144 - 7241277 | 43212.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_114134 | Not Available | Positive | 7241287 - 7242363 | 41041.5 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421820_114135 | Not Available | Positive | 7242385 - 7244241 | 70984.6 |
| udp-glucuronate 4-epimerase | SAMN05421820_114136 | Not Available | Positive | 7244238 - 7245293 | 39814.6 |
| pectate lyase | SAMN05421820_114137 | Not Available | Positive | 7245300 - 7246301 | 36962.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421820_114138 | Not Available | Positive | 7246286 - 7247428 | 43097.2 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_114139 | Not Available | Positive | 7247455 - 7248483 | 39882.8 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05421820_114140 | Not Available | Positive | 7248530 - 7249333 | 31067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

