Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_11451 | Not Available | Positive | 7146273 - 7146851 | 22238.9 |
| hypothetical protein | SAMN05421820_11452 | Not Available | Positive | 7146841 - 7147281 | 16313.3 |
| hypothetical protein | SAMN05421820_11453 | Not Available | Positive | 7147366 - 7147812 | 16472.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_11454 | Not Available | Positive | 7147920 - 7149308 | 52641.2 |
| trna modification gtpase | SAMN05421820_11455 | Not Available | Negative | 7149410 - 7150780 | 49595.6 |
| glycosyl hydrolases family 38 c-terminal domain-containing protein | SAMN05421820_11456 | Not Available | Negative | 7150936 - 7153593 | 99277.8 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN05421820_11457 | Not Available | Negative | 7153651 - 7154625 | 36919.9 |
| hypothetical protein | SAMN05421820_11458 | Not Available | Negative | 7154646 - 7155461 | 31356.3 |
| mfs transporter, sp family, arabinose:h+ symporter | SAMN05421820_11459 | Not Available | Negative | 7155465 - 7156865 | 51526.4 |
| mannose-6-phosphate isomerase, class i | SAMN05421820_11460 | Not Available | Negative | 7156926 - 7158704 | 68719.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

