Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase d | SAMN05421820_113120 | Not Available | Positive | 6938507 - 6939964 | 52375.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421820_113121 | Not Available | Positive | 6940276 - 6941391 | 41684.1 |
| conserved hypothetical protein, hne_0200 family | SAMN05421820_113122 | Not Available | Negative | 6941473 - 6942543 | 40239.6 |
| parallel beta-helix repeat-containing protein | SAMN05421820_113123 | Not Available | Negative | 6942546 - 6943829 | 46479.0 |
| tonb-dependent receptor plug domain | SAMN05421820_113124 | Not Available | Negative | 6943855 - 6946608 | 101057.0 |
| dna-binding transcriptional regulator, acrr family | SAMN05421820_113125 | Not Available | Negative | 6946696 - 6947298 | 23139.0 |
| ompa family protein | SAMN05421820_113126 | Not Available | Negative | 6947536 - 6948054 | 19113.1 |
| iron complex outermembrane recepter protein | SAMN05421820_113127 | Not Available | Positive | 6948317 - 6950668 | 85844.9 |
| hypothetical protein | SAMN05421820_113128 | Not Available | Positive | 6950681 - 6950827 | 5364.6 |
| dgtpase | SAMN05421820_113129 | Not Available | Positive | 6950784 - 6952127 | 50681.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

